2026 V4SDB Student Summer School Programme

Preliminary programme

Tuesday, September 1

Time Activity
13:00-14:00 Registration
14:00-15:30 “Spatial Biology: Towards Decoding Tissue Architecture in Development, Health and Disease”
Public Lecture by Enikő Lázár (KTH Royal Institute of Technology)
Room 0-821 (Bolyai János terem)
16:00-17:00 Student Flash Talks
Room 7-424 (Bioinformatics Lab)
17:00-17:30 Bruker Hive Presentation
20:00-23:00 Social Program (at The Grund)

Wednesday, September 2

Time Activity
09:00-13:00 KTH Practical Block No. 1 — Raphaël Mauron
13:00-14:00 Lunch
14:00-15:00 “Use of Visium/Xenium spatial transcriptomics to understand mechanisms of brain disorders”
Konstantin Khodosevich (BRIC, University of Copenhagen) — online
15:00-18:00 BRIC Practical Block — Katarina Dragicevic

Thursday, September 3

Time Activity
09:30-13:00 KTH Practical Block No. 2 — Sergio Marco Salas
13:00-14:00 Lunch
14:00-14:40 10x Genomics/Genetica Presentation
Carta Genum: Making Spatial Data Analysis Accessible to Every Researcher
Ivana Dobiášovská (Genetica Group)
14:40-15:00 Break
15:00-18:00 KTH Practical Block No. 3 — Shouzhen Bao

Friday, September 4

Time Activity
09:00-12:00 Talks on MERFISH:

“Image-Based Spatial Transcriptomics with smFISH: From Probe Design to Image Analysis” — Jonathan Enriquez (Institut de Génomique Fonctionnelle de Lyon) — in person

“Whole-embryo spatiotemporal transcriptomics at subcellular resolution” — Yinan Wan (University of Basel) — online
12:00-14:00 MERFISH Practical
Programme notes
  • Except for the opening lecture (delivered in room 0-821), all the classes of the workshop will take place in the Bioinformatics Lab of the Biology Institute, room 7-424
  • All sessions include breaks to maintain engagement and provide networking opportunities
  • The Bruker Hive and 10x Genomics/Genetica sponsor presentations are scheduled for 40 minutes each (Thursday 09:00-09:40 and 14:00-14:40); the remaining 20 minutes of each hour are kept as a short break
  • Konstantin Khodosevich’s session (Wednesday) and Yinan Wan’s talk (Friday) will be delivered online

Location

The Summer School will take place on the premises of the Faculty of Science of ELTE Eötvös Loránd University - Pázmány Péter stny. 1/C, 1117 Budapest.